SequenceAnnotationConfig

interface SequenceAnnotationConfig

An interface that defines the parameters for initializing a SequenceAnnotation.

Properties

end

end: undefined | number

The end position of the annotation in semantic coordinates (generally a position on a chromosome in base pairs).

id

id: undefined | string

A unique identifier for an Annotation object. If an ID is not provided, one will be automatically generated by SODA when the Annotation is instantiated.

row

row: undefined | number

This describes which horizontal row the Annotation will be rendered in a Chart, assuming that the y-positioning is not overwritten during a call to the glyph rendering API.

sequence

sequence: string

The sequence string to be rendered.

start

start: undefined | number

The start position of the annotation in semantic coordinates (generally a position on a chromosome in base pairs).

tag

tag: undefined | string

An optional tag for the annotation. This can be thought of as a something of a secondary ID.

width

width: undefined | number

The width of the annotation in semantic coordinates.